Data Preparation - Use nQuire's Data

This function reduce a three column data frame to two columns by randomly sampling allele A or B for every site. This is used in our function process_nquire()

Usage

nQuire_reformat(xm)

Arguments

xm

A matrix with three columns: Total Coverage, Counts for Allele A, and Counts for Allele B.

Value

Numeric Matrix with total coverage and coverage for a randomly sampled allele.

Examples

 if(exists("nxm")){
  out <- nQuire_reformat(nxm)
}